Solyc02g068550.2.1 (Solyc02g068550.2)

Aliases : Solyc02g068550.2

Description : 30.11 signalling.light Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FAR-RED IMPAIRED RESPONSE 1 (FAR1)

Gene families : OG_01_0000317 (Gene family) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g068550.2.1
Cluster HCCA cluster: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AT1G76320 FRS4 FAR1-related sequence 4 0.04 Gene family
AT2G27110 FRS3 FAR1-related sequence 3 0.02 Gene family
GSVIVT01023847001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
GSVIVT01029436001 No alias 30.11 signalling.light FAR1-related sequence 4 (FRS4) 0.02 Gene family
GSVIVT01033506001 No alias 30.11 signalling.light FAR1-related sequence 5 (FRS5) 0.02 Gene family
GSVIVT01037455001 No alias 28.99 DNA.unspecified FAR1-related sequence 3 (FRS3) 0.04 Gene family
Zm00001d034282 GRMZM2G463730 30.11 signalling.light FAR1-related sequence 5 (FRS5) 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 319 412
IPR004330 FAR1_DNA_bnd_dom 96 202
IPR007527 Znf_SWIM 600 634
No external refs found!