AMTR_s00111p00145590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.127

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase


Gene families : OG_01_0001076 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001076_tree ,
OG_02_0001162 (LandPlants) Phylogenetic Tree(s): OG_02_0001162_tree ,
OG_03_0001063 (SeedPlants) Phylogenetic Tree(s): OG_03_0001063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00145590
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT5G47200 ATRAB1A, ATRABD2B, RAB1A RAB GTPase homolog 1A 0.02 Archaeplastida
Cre12.g560150 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Smo228158 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
GSVIVT01023224001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 LandPlants
Smo228158 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 LandPlants
GSVIVT01023224001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 SeedPlants
LOC_Os01g37800.1 No alias D-class RAB GTPase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 168
No external refs found!