AMTR_s00111p00145590 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.127

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase

Gene families : OG_01_0001076 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001076_tree ,
OG_02_0001162 (LandPlants) Phylogenetic Tree(s): OG_02_0001162_tree ,
OG_03_0001063 (SeedPlants) Phylogenetic Tree(s): OG_03_0001063_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00111p00145590
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
AT5G47200	ATRAB1A, ATRABD2B, RAB1A	RAB GTPase homolog 1A	0.02	Archaeplastida
Cre12.g560150	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
Smo228158	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
GSVIVT01023224001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	LandPlants
Smo228158	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	LandPlants
GSVIVT01023224001	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	SeedPlants
LOC_Os01g37800.1	No alias	D-class RAB GTPase	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	168

External Links

No external refs found!