Pp3c2_12230V3.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000000 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_12230V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266930 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
AMTR_s00004p00087070 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AMTR_s00039p00210570 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
AMTR_s00078p00067180 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g46050,... 0.01 Archaeplastida
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.02 Archaeplastida
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.02 Archaeplastida
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Archaeplastida
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT3G12770 MEF22 mitochondrial editing factor 22 0.04 Archaeplastida
AT4G18840 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Archaeplastida
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.07 Archaeplastida
Gb_33070 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 Archaeplastida
LOC_Os01g27650.1 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 Archaeplastida
LOC_Os06g30940.1 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 Archaeplastida
LOC_Os07g19400.1 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.01 Archaeplastida
LOC_Os08g04400.1 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 Archaeplastida
LOC_Os08g33700.1 No alias Pentatricopeptide repeat-containing protein At3g47530... 0.02 Archaeplastida
LOC_Os12g13110.1 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.05 Archaeplastida
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_49629g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Smo111910 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 Archaeplastida
Solyc01g081290.4.1 No alias protein kinase (PEPRK) 0.03 Archaeplastida
Solyc01g091610.1.1 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.08 Archaeplastida
Solyc02g011680.4.1 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.11 Archaeplastida
Solyc02g084830.4.1 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.04 Archaeplastida
Solyc03g051780.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.08 Archaeplastida
Solyc03g116840.3.1 No alias RNA editing factor (OTP81) 0.08 Archaeplastida
Solyc06g053850.4.1 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Solyc09g007040.1.1 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.05 Archaeplastida
Solyc11g007230.1.1 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.05 Archaeplastida
Solyc11g040060.3.1 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.05 Archaeplastida
Zm00001e013713_P001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.02 Archaeplastida
AMTR_s00039p00210570 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 LandPlants
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.04 LandPlants
AMTR_s00109p00094190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.02 LandPlants
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 LandPlants
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 LandPlants
AT5G13270 RARE1 Pentatricopeptide repeat (PPR) superfamily protein 0.01 LandPlants
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 LandPlants
Gb_33070 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 LandPlants
LOC_Os01g27650.1 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 LandPlants
LOC_Os06g30940.1 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 LandPlants
LOC_Os07g19400.1 No alias Pentatricopeptide repeat-containing protein At1g71490... 0.01 LandPlants
LOC_Os08g04400.1 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 LandPlants
LOC_Os11g37660.1 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 LandPlants
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
Solyc01g081290.4.1 No alias protein kinase (PEPRK) 0.03 LandPlants
Solyc01g091610.1.1 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.07 LandPlants
Solyc02g011680.4.1 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.08 LandPlants
Solyc02g084830.4.1 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.04 LandPlants
Solyc03g116840.3.1 No alias RNA editing factor (OTP81) 0.08 LandPlants
Solyc06g053850.4.1 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 LandPlants
Solyc09g007040.1.1 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 LandPlants
Solyc11g007230.1.1 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 LandPlants
Solyc11g040060.3.1 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.05 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!