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  5. Aspi01Gene57219.t1

Aspi01Gene57219.t1 (Aspi01Gene57219)


Aliases : Aspi01Gene57219

Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene57219.t1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.04 OrthoFinder output from all 47 species
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.04 OrthoFinder output from all 47 species
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g15665 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51209 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.25 No alias CSC1-like protein ERD4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g04268 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26256 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009282001 RXW8 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
GSVIVT01011464001 HYP1, ATHYP1 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
GSVIVT01021562001 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Gb_08555 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g35050.3 LOC_Os01g35050 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Nbi_g04933 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17620 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18723 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21616 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012943 ERD4 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Smo41460 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 7 178
IPR027815 CSC1/OSCA1-like_cyt 583 711
IPR003864 CSC1/OSCA1-like_7TM 722 957
No external refs found!