Solyc02g067020.1.1 (Solyc02g067020.1)


Aliases : Solyc02g067020.1

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein ?//CONTAINS one AP2 domain. There are 12 members in this subfamily including RAP2.11.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g067020.1.1
Cluster HCCA cluster: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.05 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.01 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.03 Gene family
AT3G11020 DREB2B, DREB2 DRE/CRT-binding protein 2B 0.01 Gene family
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.02 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.05 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.01 Gene family
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G65130 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
GSVIVT01013903001 No alias No description available 0.06 Gene family
GSVIVT01013905001 No alias No description available 0.03 Gene family
GSVIVT01013913001 No alias No description available 0.02 Gene family
GSVIVT01013914001 No alias No description available 0.03 Gene family
GSVIVT01013916001 No alias No description available 0.04 Gene family
GSVIVT01013917001 No alias No description available 0.02 Gene family
GSVIVT01013918001 No alias No description available 0.03 Gene family
GSVIVT01013929001 No alias No description available 0.03 Gene family
GSVIVT01013931001 No alias No description available 0.03 Gene family
LOC_Os01g12440 Os01g0224100 No description available 0.02 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.17 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.02 Gene family
LOC_Os03g09170 Os03g0191900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.01 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.02 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_104230g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.02 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.03 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.01 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.01 Gene family
Solyc12g009240.1.1 Solyc12g009240.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d017366 GRMZM2G139765 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 19 68
No external refs found!