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  5. Aspi01Gene56748.t1

Aspi01Gene56748.t1 (ATHB1, ATHB-1, HAT5,...)


Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Aspi01Gene56748

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene56748.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00215130 ATHB5, ATHB-5,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 OrthoFinder output from all 47 species
Ceric.09G061500.1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.18G080300.1 ATHB21, HB21,... HD-ZIP I/II-type transcription factor & original... 0.07 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019012001 ATHB40, HB40, HB-5 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Gb_04698 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os08g37580.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
MA_12866g0010 ATHB21, HB21, HB-2 transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
MA_60543g0010 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Pir_g34758 HB-7, ATHB-7, ATHB7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo18217 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Solyc03g082550.3.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e023458_P003 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
Zm00001e034785_P001 HB-12, ATHB-12,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e038901_P001 ATHB13, Zm00001e038901 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 2 41
No external refs found!