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  5. Aspi01Gene56571.t1

Aspi01Gene56571.t1 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15, Aspi01Gene56571

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene56571.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00146900 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00195390 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00058870 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 OrthoFinder output from all 47 species
AT3G29030 EXP5, ATHEXP... expansin A5 0.02 OrthoFinder output from all 47 species
AT3G60570 ATHEXP BETA 1.3,... expansin B5 0.03 OrthoFinder output from all 47 species
AT5G05290 EXPA2, ATHEXP... expansin A2 0.02 OrthoFinder output from all 47 species
AT5G39280 ATHEXP ALPHA ... expansin A23 0.03 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12167 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12260 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30155 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G042800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.29G045500.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16993 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16994 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40575 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46781 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005917001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01008762001 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01013208001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01032681001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Gb_09118 No alias alpha-class expansin 0.02 OrthoFinder output from all 47 species
Gb_19114 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.04 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g14650.1 ATEXPA1, EXP1,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os02g16809.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06060.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g46650.1 ATHEXP BETA 1.4,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os05g19570.1 LOC_Os05g19570 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40710.1 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Lfl_g39394 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10020g0010 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_10425823g0010 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_10427897g0010 EXPB3, ATEXPB3,... beta-class expansin 0.02 OrthoFinder output from all 47 species
MA_166764g0010 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_21214g0010 EXPB3, ATEXPB3,... beta-class expansin 0.02 OrthoFinder output from all 47 species
MA_2687768g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_30127g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_3618g0010 ATEXPA1, EXP1,... Expansin-A15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_36587g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_37884g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_418372g0010 EXPA8, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
MA_474624g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_4979g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_915221g0010 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g09770.1 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp8g18860.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Ppi_g39288 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011304 EXPA8, ATHEXP... alpha-class expansin & original description: CDS=181-945 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019977 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=392-1180 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019980 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=1-819 0.04 OrthoFinder output from all 47 species
Sam_g17226 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Smo230202 EXPA2, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Solyc03g093390.4.1 ATHEXP BETA 1.4,... Expansin-B15 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Spa_g11698 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54039 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31784 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32125 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002243_P002 ATEXLA3, EXPL3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e002274_P001 ATHEXP BETA 1.4,... Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 343.0) 0.02 OrthoFinder output from all 47 species
Zm00001e015337_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e033407_P001 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037880_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 82 170
IPR007117 Expansin_CBD 181 258
No external refs found!