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  5. Aspi01Gene56524.t1

Aspi01Gene56524.t1 (Aspi01Gene56524)


Aliases : Aspi01Gene56524

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene56524.t1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248880 ZFN1,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00074p00109750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
AT2G32930 ZFN2 zinc finger nuclease 2 0.03 OrthoFinder output from all 47 species
Adi_g044815 ZFN2 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Gb_37448 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g18764 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g17138 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039538_P001 Zm00001e039538 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 116 141
IPR000571 Znf_CCCH 72 97
No external refs found!