Aspi01Gene56365.t1 (PUB25, Aspi01Gene56365)

Aliases : PUB25, Aspi01Gene56365

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene56365.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00130440	CMPG2, ATCMPG2,...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
AT3G52450	PUB22	plant U-box 22	0.03	OrthoFinder output from all 47 species
AT5G64660	CMPG2, ATCMPG2	CYS, MET, PRO, and GLY protein 2	0.03	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g107693	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g21197	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g06990	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28879	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33086	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g40105	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g57047	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g62359	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g12417	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20185	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g34288	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19350.t1	PUB26, Aspi01Gene19350	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene27391.t1	PUB26, Aspi01Gene27391	U-Box-group-III E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene35689.t1	PUB25, Aspi01Gene35689	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene44328.t1	PUB23, Aspi01Gene44328	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g16814	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07421	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11691	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g46168	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g39747	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g14303	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_02627	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_02629	No alias	U-box domain-containing protein 26 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_16228	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Gb_27794	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_29851	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os01g64570.1	PUB23, LOC_Os01g64570	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g50460.1	LOC_Os02g50460	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os03g13740.1	LOC_Os03g13740	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os12g06410.1	PUB24, LOC_Os12g06410	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Len_g01810	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g16219	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10432179g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10432813g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10433846g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_17715g0010	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_311559g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_33190g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_415344g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_481299g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_58844g0020	PUB22	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_779502g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp3g22740.1	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp3g22750.1	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ore_g10378	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35004	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g27483	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c3_4891V3.1	PUB29, ATPUB29,...	plant U-box 26	0.02	OrthoFinder output from all 47 species
Ppi_g04485	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014903	PUB26	not classified & original description: CDS=1-1419	0.03	OrthoFinder output from all 47 species
Solyc01g005160.4.1	Solyc01g005160	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007000.4.1	PUB22, Solyc01g007000	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007030.3.1	PUB22, Solyc01g007030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007050.3.1	PUB24, Solyc01g007050	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g009330.1.1	PUB22, Solyc01g009330	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e006484_P001	PUB23, Zm00001e006484	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e014752_P001	PUB23, Zm00001e014752	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e014766_P001	CMPG2, ATCMPG2,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Zm00001e022679_P001	CMPG2, ATCMPG2,...	U-box domain-containing protein 29 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	11	80

External Links

No external refs found!

Aspi01Gene56365.t1 (PUB25, Aspi01Gene56365)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation