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  5. Aspi01Gene55921.t1

Aspi01Gene55921.t1 (OTP82, Aspi01Gene55921)


Aliases : OTP82, Aspi01Gene55921

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene55921.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g002819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051856 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62647.t1 Aspi01Gene62647 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0370.g067092 No alias not classified & original description: CDS=34-3717 0.04 OrthoFinder output from all 47 species
Azfi_s0641.g080692 No alias not classified & original description: CDS=1-1947 0.04 OrthoFinder output from all 47 species
Azfi_s0693.g082556 No alias not classified & original description: CDS=1-2178 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.03 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Lfl_g02854 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07562 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012043 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1878 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019309 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020618 REME1 not classified & original description: CDS=24-1478 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Sam_g02113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo130420 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.03 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 134 159
IPR002885 Pentatricopeptide_repeat 236 259
IPR002885 Pentatricopeptide_repeat 24 54
IPR046848 E_motif 278 339
IPR002885 Pentatricopeptide_repeat 162 206
IPR002885 Pentatricopeptide_repeat 56 103
No external refs found!