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  5. Aspi01Gene55910.t1

Aspi01Gene55910.t1 (SIZ1, ATSIZ1, Aspi01Gene55910)


Aliases : SIZ1, ATSIZ1, Aspi01Gene55910

Description : E3 SUMO ubiquitin ligase *(SIZ1) & original description: none


Gene families : OG0002076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene55910.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00092680 SIZ1, ATSIZ1,... Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
AT5G60410 SIZ1, ATSIZ1 DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 OrthoFinder output from all 47 species
Adi_g019402 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057778 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16402 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.1Z183600.1 SIZ1, ATSIZ1,... E3 SUMO ubiquitin ligase *(SIZ1) & original description:... 0.04 OrthoFinder output from all 47 species
Cre12.g500900 SIZ1, ATSIZ1 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Dcu_g09780 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025151001 SIZ1, ATSIZ1 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Gb_29862 SIZ1, ATSIZ1 SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g50980.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03430.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.02 OrthoFinder output from all 47 species
MA_10436942g0020 SIZ1, ATSIZ1 SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
Mp6g08590.1 SIZ1, ATSIZ1 SUMO E3 ligase (SIZ1) 0.02 OrthoFinder output from all 47 species
Pir_g08461 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011141 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc11g069160.3.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 174 225
IPR004181 Znf_MIZ 420 468
No external refs found!