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  5. Aspi01Gene55862.t1

Aspi01Gene55862.t1 (MBD05, MBD5, ATMBD5,...)


Aliases : MBD05, MBD5, ATMBD5, Aspi01Gene55862

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene55862.t1

Target Alias Description ECC score Gene Family Method Actions
Aob_g26984 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16213 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025031001 ATMBD7, MBD7 Chromatin organisation.DNA methylation.ROS1-mediated DNA... 0.02 OrthoFinder output from all 47 species
Msp_g13225 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17409 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01254 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002716 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=802-2949 0.04 OrthoFinder output from all 47 species
Spa_g18250 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04676 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 234 285
No external refs found!