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  5. Aspi01Gene55581.t1

Aspi01Gene55581.t1 (Aspi01Gene55581)


Aliases : Aspi01Gene55581

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene55581.t1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00052450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69874.t1 CAMTA3, SR1,... CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G055700.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G019600.1 Ceric.31G019600 CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g34966 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g03150.1 CAMTA3, SR1 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Ore_g17074 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17075 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 558 646
IPR000048 IQ_motif_EF-hand-BS 769 786
IPR000048 IQ_motif_EF-hand-BS 791 810
No external refs found!