Aspi01Gene55189.t1 (Aspi01Gene55189)


Aliases : Aspi01Gene55189

Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene55189.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 OrthoFinder output from all 47 species
AT2G02340 AtPP2-B8, PP2-B8 phloem protein 2-B8 0.02 OrthoFinder output from all 47 species
Aob_g29919 PP2-A1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25971 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g03594.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430103g0010 AtPP2-B10, PP2-B10 F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g08250.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002865 No alias not classified & original description: CDS=117-1025 0.04 OrthoFinder output from all 47 species
Sam_g12339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g017960.2.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025886 PP2-like 142 224
No external refs found!