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  5. Aspi01Gene55088.t1

Aspi01Gene55088.t1 (Aspi01Gene55088)


Aliases : Aspi01Gene55088

Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene55088.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G69580 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g10728 KAN, KAN1 KANADI-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g01625 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g04252 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g07729 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025591 No alias not classified & original description: CDS=203-1426 0.03 OrthoFinder output from all 47 species
Azfi_s0124.g048483 No alias transcription factor *(CLAUSA) & original description: CDS=1-1350 0.03 OrthoFinder output from all 47 species
Cba_g14463 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g16380 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G027900.1 Ceric.21G027900 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g39292 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16004 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009589001 KAN4, ATS RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
GSVIVT01015900001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os06g35140.1 LOC_Os06g35140 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g15642 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_259372g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g25933 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06354 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10280 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pnu_g11923 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005338 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007778 No alias not classified & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012676 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g08411 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo414222 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc06g066340.4.1 KAN2, Solyc06g066340 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Solyc12g098370.2.1 Solyc12g098370 G2-like GARP transcription factor. transcription factor (PHR1) 0.02 OrthoFinder output from all 47 species
Spa_g22386 UNE16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e004300_P003 Zm00001e004300 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e005097_P001 KAN4, ATS, Zm00001e005097 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e009653_P001 Zm00001e009653 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 149 196
IPR001005 SANT/Myb 56 106
No external refs found!