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  5. Aspi01Gene54798.t1

Aspi01Gene54798.t1 (Aspi01Gene54798)


Aliases : Aspi01Gene54798

Description : not classified & original description: none


Gene families : OG0007313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene54798.t1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00112500 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AT1G27880 No alias DEAD/DEAH box RNA helicase family protein 0.1 OrthoFinder output from all 47 species
Als_g50301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044748 No alias not classified & original description: CDS=162-4085 0.05 OrthoFinder output from all 47 species
Ceric.33G047600.1 Ceric.33G047600 not classified & original description: pacid=50606429... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.41 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre15.g634701 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g34327 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os04g40970.1 LOC_Os04g40970 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g58861 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp6g05780.1 No alias ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g09957 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021809 No alias not classified & original description: CDS=1-3792 0.06 OrthoFinder output from all 47 species
Solyc05g014690.3.1 Solyc05g014690 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g37487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041104_P001 Zm00001e041104 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 704 867
IPR001650 Helicase_C 915 1011
IPR003034 SAP_dom 414 446
IPR021110 DNA_rep_checkpnt_protein 11 87
No external refs found!