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  5. Aspi01Gene54713.t1

Aspi01Gene54713.t1 (IXR1, CEV1, CESA3,...)


Aliases : IXR1, CEV1, CESA3, ATCESA3, ATH-B, Aspi01Gene54713

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene54713.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g059427 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082225 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aop_g18284 MUR10, ATCESA7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07913.t1 CESA6, PRC1,... catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Aspi01Gene08723.t1 ATH-A, CESA2,... catalytic component *(CesA) of cellulose synthase... 0.13 OrthoFinder output from all 47 species
Aspi01Gene13874.t1 ATH-A, CESA2,... catalytic component *(CesA) of cellulose synthase... 0.09 OrthoFinder output from all 47 species
Aspi01Gene16676.t1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.07 OrthoFinder output from all 47 species
Aspi01Gene23400.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30179.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45259.t2 ATCSLD2, CSLD2,... mannan synthase *(CSLD) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene58632.t1 ATH-A, CESA2,... catalytic component *(CesA) of cellulose synthase... 0.08 OrthoFinder output from all 47 species
Aspi01Gene69637.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene71928.t1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.14 OrthoFinder output from all 47 species
Aspi01Gene72350.t1 IXR1, CEV1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72352.t1 AtCESA1, RSW1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15568 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_23305 ATCSLD3, KJK, CSLD3 Cellulose synthase A catalytic subunit 3 [UDP-forming]... 0.02 OrthoFinder output from all 47 species
Ore_g42825 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Pnu_g19575 ATCSLD4, CSLD4 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_22600V3.1 ATH-A, CESA2,... Cellulose synthase family protein 0.02 OrthoFinder output from all 47 species
Pp3c9_3670V3.1 Pp3c9_3670 cellulose synthase-like D3 0.01 OrthoFinder output from all 47 species
Smo230382 ATCSLD3, KJK, CSLD3 Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
Solyc08g005280.2.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 374 1031
IPR027934 CES_Znf_RING 10 79
No external refs found!