Aspi01Gene54625.t1 (Aspi01Gene54625)


Aliases : Aspi01Gene54625

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene54625.t1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00130050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42356 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30430 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.02 OrthoFinder output from all 47 species
Azfi_s0148.g053129 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.03 OrthoFinder output from all 47 species
Azfi_s0257.g060572 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Azfi_s0398.g068192 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2229 0.03 OrthoFinder output from all 47 species
Cba_g04042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G078400.1 Ceric.11G078400 not classified & original description: pacid=50596841... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.02 OrthoFinder output from all 47 species
Dac_g31026 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.04 OrthoFinder output from all 47 species
GSVIVT01012159001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_29557 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Len_g05426 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33522 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11454g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08638 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18893 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22233 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005517 CRR22 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012420 No alias not classified & original description: CDS=519-2384 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.03 OrthoFinder output from all 47 species
Sam_g27130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Solyc03g098420.3.1 Solyc03g098420 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc03g119120.3.1 Solyc03g119120 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc04g074160.3.1 Solyc04g074160 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc04g082870.1.1 Solyc04g082870 Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Solyc09g090220.3.1 Solyc09g090220 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 70 93
IPR002885 Pentatricopeptide_repeat 94 141
No external refs found!