Aspi01Gene53169.t1 (Aspi01Gene53169)


Aliases : Aspi01Gene53169

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene53169.t1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16785 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61873 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.01 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.02 OrthoFinder output from all 47 species
Cba_g05323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G016600.1 Ceric.07G016600 not classified & original description: pacid=50626137... 0.02 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.01 OrthoFinder output from all 47 species
Ceric.19G076100.1 Ceric.19G076100 not classified & original description: pacid=50575482... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21341 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
GSVIVT01036169001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
Len_g03325 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.01 OrthoFinder output from all 47 species
Msp_g06933 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g40933 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g04512 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.01 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18446 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05116 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 104 133
IPR002885 Pentatricopeptide_repeat 235 259
IPR002885 Pentatricopeptide_repeat 159 207
IPR002885 Pentatricopeptide_repeat 261 307
No external refs found!