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  5. Aspi01Gene52600.t1

Aspi01Gene52600.t1 (EXPB3, ATEXPB3,...)


Aliases : EXPB3, ATEXPB3, ATHEXP BETA 1.6, Aspi01Gene52600

Description : not classified & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene52600.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00103570 ATEXPA4, ATEXP4,... Expansin-A4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G45960 ATEXLA3, EXPL3,... expansin-like A3 0.01 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 OrthoFinder output from all 47 species
Adi_g042098 EXP5, ATHEXP... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11063 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52111 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20801 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g027115 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=159-980 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027126 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=1-723 0.01 OrthoFinder output from all 47 species
Ceric.17G042800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
LOC_Os03g06060.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Tin_g30401 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e014231_P001 ATEXPA10,... Expansin-A13 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e019433_P001 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 169 248
IPR009009 RlpA-like_DPBB 74 156
No external refs found!