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Aliases : PKL, GYM, CHR6, SSL2, CHD3, Aspi01Gene52538
Description : not classified & original description: none
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00058700 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00165640 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G13370 | CHR5 | chromatin remodeling 5 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G25170 | PKL, GYM, CHR6,... | chromatin remodeling factor CHD3 (PICKLE) | 0.03 | OrthoFinder output from all 47 species | |
| AT2G28290 | SYD, CHR3 | P-loop containing nucleoside triphosphate hydrolases... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G44800 | PKR1, CHR4 | chromatin remodeling 4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004816 | SYD, CHR3 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g011955 | SYD, CHR3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058025 | CHR01, CHR1,... | chromatin remodeling factor *(DDM1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g078005 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g082550 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02726 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g11507 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g12634 | PKL, GYM, CHR6,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g17670 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g27421 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g36219 | ATCHR12 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01984 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05142 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06850 | PKR1, CHR4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16533 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g20612 | PKR1, CHR4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g29249 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g29989 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13607 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g20304 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24030.t1 | CHR5, Aspi01Gene24030 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene47132.t1 | SYD, CHR3,... | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013433 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06827 | PKR1, CHR4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g33369 | CHR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G020300.1 | CHR5, Ceric.10G020300 | component *(CHR5) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.19G069200.1 | CHR11, Ceric.19G069200 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z205000.1 | PKR1, CHR4,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G015700.1 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G008600.1 | SYD, CHR3,... | SMARCA component *(SYD/BRM/MINU) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000128.11 | CHR17 | ISWI chromatin-remodeling complex ATPase CHR17... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000144.188 | CHR01, CHR1,... | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000983.26 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020960.24 | CHR5 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g179300 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Cre08.g377200 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g02069 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03207 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03216 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05806 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38948 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g42511 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07066 | ATCHR12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012117001 | PKR1, CHR4 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017791001 | CHR17 | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017820001 | SYD, CHR3 | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035901001 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g05230.1 | ATCHR12, LOC_Os05g05230 | chromatin remodeling factor (Snf2) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g08480.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g29294 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g35371 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04300 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g06769 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g30624 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
| MA_8926002g0010 | SYD, CHR3 | Chromatin structure-remodeling complex protein SYD... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g05480.1 | CHR5 | chromatin remodeling factor (Chd1). component CHR5 of... | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g26680.1 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g00040.1 | PKR1, CHR4 | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g12025 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12701 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12901 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18803 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g36640 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g52065 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04716 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07635 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008777 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29220 | No alias | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g29292 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36172 | No alias | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo164481 | SYD, CHR3 | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Smo177985 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g068560.3.1 | PKR1, CHR4,... | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g065730.3.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g062010.3.1 | SYD, CHR3, Solyc11g062010 | chromatin remodeling factor (Snf2) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g099910.2.1 | CHR5, Solyc12g099910 | chromatin remodeling factor (Chd1). component CHR5 of... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g02554 | PKL, GYM, CHR6,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g21583 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g24876 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30961 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g36192 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08468 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010722_P005 | ATCHR12, Zm00001e010722 | Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030969_P003 | SYD, CHR3, Zm00001e030969 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040406_P002 | ATCHR12, Zm00001e040406 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001650 | Helicase_C | 59 | 138 |
| No external refs found! |