Solyc02g037530.3.1 (Solyc02g037530.3)


Aliases : Solyc02g037530.3

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. auxin response factor 8 (ARF8)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g037530.3.1
Cluster HCCA cluster: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.03 Gene family
GSVIVT01021553001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01025691001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01035204001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os01g48060 Os01g0670800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
LOC_Os04g43910 Os04g0519700 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc07g016180.3.1 Solyc07g016180.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 121 222
IPR010525 Auxin_resp 247 330
IPR033389 AUX/IAA_dom 706 795
No external refs found!