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  5. Aspi01Gene52145.t1

Aspi01Gene52145.t1 (CRR22, Aspi01Gene52145)


Aliases : CRR22, Aspi01Gene52145

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene52145.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Adi_g003839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17011 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.01 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.04G048900.1 Ceric.04G048900 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.06G009700.1 VAC1, ECB2,... not classified & original description: pacid=50619980... 0.03 OrthoFinder output from all 47 species
Ceric.39G023200.1 CRR2, Ceric.39G023200 not classified & original description: pacid=50582462... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23588 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012938001 SLO1 Pentatricopeptide repeat-containing protein At2g29760,... 0.01 OrthoFinder output from all 47 species
GSVIVT01021374001 No alias Pentatricopeptide repeat-containing protein At5g46460,... 0.01 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
Len_g31186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
MA_217g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Msp_g47042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.03 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo115259 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Spa_g10760 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53483 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 475 523
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 376 422
IPR002885 Pentatricopeptide_repeat 550 574
IPR002885 Pentatricopeptide_repeat 349 372
IPR002885 Pentatricopeptide_repeat 277 324
No external refs found!