Aspi01Gene51625.t1 (PUB15, Aspi01Gene51625)

Aliases : PUB15, Aspi01Gene51625

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene51625.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00138p00053700	evm_27.TU.AmTr_v1...	U-box domain-containing protein 21 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Aspi01Gene18443.t1	PUB23, Aspi01Gene18443	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aspi01Gene19375.t1	PUB26, Aspi01Gene19375	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Aspi01Gene43217.t1	Aspi01Gene43217	not classified & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os04g49970.1	PUB23, LOC_Os04g49970	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_61761g0010	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Smo172230	No alias	U-box domain-containing protein 14 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Zm00001e015491_P001	PUB23, Zm00001e015491	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Zm00001e019173_P001	PUB23, Zm00001e019173	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e041397_P001	PUB23, Zm00001e041397	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	14	83

External Links

No external refs found!