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  5. Aspi01Gene51578.t1

Aspi01Gene51578.t1 (Aspi01Gene51578)


Aliases : Aspi01Gene51578

Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene51578.t1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00170840 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G44930 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
Als_g21124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08488.t1 Aspi01Gene08488 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08489.t1 Aspi01Gene08489 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08490.t1 Aspi01Gene08490 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22026.t1 Aspi01Gene22026 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene29768.t1 Aspi01Gene29768 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48417.t1 Aspi01Gene48417 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51581.t1 Aspi01Gene51581 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53575.t2 Aspi01Gene53575 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene57933.t1 Aspi01Gene57933 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001131001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033794001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_23451 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33430.1 LOC_Os11g33430 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g33942.1 LOC_Os11g33942 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g23654 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g35600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g26242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012986 No alias not classified & original description: CDS=1-1557 0.02 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004158 DUF247_pln 351 504
IPR004158 DUF247_pln 28 320
No external refs found!