Aspi01Gene51042.t1 (EIF4A-2, Aspi01Gene51042)

Aliases : EIF4A-2, Aspi01Gene51042

Description : mRNA unwinding factor *(eIF4A)) & original description: none

Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene51042.t1
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
Aob_g01779	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species
Cba_g75441	EIF4A-2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001339.22	EIF4A-III	RNA processing.RNA quality control Exon Junction complex...	0.01	OrthoFinder output from all 47 species
GSVIVT01015173001	EIF4A-2	Protein biosynthesis.translation initiation.mRNA...	0.03	OrthoFinder output from all 47 species
Pir_g13467	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15917	EIF4A-2	mRNA unwinding factor *(eIF4A)) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g10962	No alias	mRNA unwinding factor *(eIF4A)) & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g35004	No alias	mRNA unwinding factor *(eIF4A)) & original description: none	0.04	OrthoFinder output from all 47 species
Smo143895	EIF4A-2	Protein biosynthesis.translation initiation.mRNA...	0.02	OrthoFinder output from all 47 species
Zm00001e013175_P002	EIF4A-2, Zm00001e013175	mRNA unwinding factor (eIF4A)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	103	264
IPR001650	Helicase_C	304	412

External Links

No external refs found!