Aspi01Gene51023.t1 (Aspi01Gene51023)

Aliases : Aspi01Gene51023

Description : regulatory RNA helicase *(RH20/RH30) of virus replication & original description: none

Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene51023.t1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g28076	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g68173	ATDRH1, DRH1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.03G059400.1	Ceric.03G059400	regulatory RNA helicase *(RH20/RH30) of virus...	0.03	OrthoFinder output from all 47 species
Gb_35545	ATDRH1, DRH1	DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g14109	ATDRH1, DRH1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12189	ATDRH1, DRH1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14840	ATDRH1, DRH1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e016763_P001	ATDRH1, DRH1,...	DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	151	320
IPR001650	Helicase_C	357	467

External Links

No external refs found!