Aliases : STK, AGL11, Aspi01Gene50728
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aspi01Gene50728.t1 | |
Cluster | HCCA: Cluster_53 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00254030 | SHP2, AGL5,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AT2G26320 | AGL33 | AGAMOUS-like 33 | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene68989.t2 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000944.9 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
Gb_34101 | SVP, AGL22 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g10554 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g32782 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_6544g0010 | STK, AGL11 | Floral homeotic protein AGAMOUS OS=Panax ginseng... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g62573 | AGL24 | MADS/AGL-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g62574 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g63634 | GL19, AGL19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g071730.4.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
Spa_g01718 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e032487_P001 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 123 | 170 |
No external refs found! |