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  5. Aspi01Gene50524.t1

Aspi01Gene50524.t1 (Aspi01Gene50524)


Aliases : Aspi01Gene50524

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene50524.t1

Target Alias Description ECC score Gene Family Method Actions
Als_g07129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62756 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0081.g038640 OTP86 not classified & original description: CDS=63-2522 0.02 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G066500.1 Ceric.30G066500 not classified & original description: pacid=50608384... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dcu_g36545 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Len_g23563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34313 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23281 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 426 472
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 826 874
IPR002885 Pentatricopeptide_repeat 326 371
IPR002885 Pentatricopeptide_repeat 625 672
IPR002885 Pentatricopeptide_repeat 697 724
IPR002885 Pentatricopeptide_repeat 728 754
IPR002885 Pentatricopeptide_repeat 126 155
IPR002885 Pentatricopeptide_repeat 526 556
IPR002885 Pentatricopeptide_repeat 299 324
IPR002885 Pentatricopeptide_repeat 97 122
IPR002885 Pentatricopeptide_repeat 901 925
IPR002885 Pentatricopeptide_repeat 599 619
IPR002885 Pentatricopeptide_repeat 400 423
IPR046848 E_motif 944 981
No external refs found!