Aspi01Gene50501.t1 (CHA2, CHR2, BRM,...)

Aliases : CHA2, CHR2, BRM, ATBRM, Aspi01Gene50501

Description : SMARCA component *(SYD/BRM/MINU) & original description: none

Gene families : OG0002912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002912_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene50501.t1
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
Adi_g003879	CHA2, CHR2, BRM, ATBRM	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g029632	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g121597	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene50501.t2	CHA2, CHR2, BRM,...	SMARCA component *(SYD/BRM/MINU) & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g40776	CHA2, CHR2, BRM, ATBRM	SMARCA component *(SYD/BRM/MINU) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g45867	CHA2, CHR2, BRM, ATBRM	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13768	CHA2, CHR2, BRM, ATBRM	SMARCA component *(SYD/BRM/MINU) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	681	986
IPR001487	Bromodomain	1690	1750
IPR001650	Helicase_C	1009	1120
IPR013103	RVT_2	1904	2042

External Links

No external refs found!