Aspi01Gene50349.t1 (ATRABE1D, ATRAB8C,...)

Aliases : ATRABE1D, ATRAB8C, RAB-E1D, ATRAB-E1D, RAB8C, Aspi01Gene50349

Description : not classified & original description: none

Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene50349.t1

Target	Alias	Description	ECC score	Gene Family Method
MA_204401g0010	RABA4D, ATRABA4D	Ras-related protein RABA4d OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g04662	ATRABE1D,...	E-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g24234	ATRABE1D,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010582	ATRABE1C,...	not classified & original description: CDS=1-537	0.03	OrthoFinder output from all 47 species
Solyc09g010370.3.1	ATRAB8,...	E-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Spa_g07929	ATRABE1D,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g19101	ATRABE1C,...	E-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	56	186

External Links

No external refs found!