1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene50266.t1

Aspi01Gene50266.t1 (TCP2, Aspi01Gene50266)


Aliases : TCP2, Aspi01Gene50266

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene50266.t1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 TCP13, TFPD,... RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.02 OrthoFinder output from all 47 species
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02917.t2 TCP3, Aspi01Gene02917 TCP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64947.t1 TCP3, Aspi01Gene64947 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G003200.1 TCP3, Ceric.01G003200 TCP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.05 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01011962001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Gb_38377 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g57190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_101752g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_3891g0010 TCP13, TFPD, PTF1 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26630 TCP2 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo89227 TCP2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc02g089830.2.1 TCP1, Solyc02g089830 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Spa_g55051 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e011911_P001 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e032821_P001 TCP2, Zm00001e032821 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e034097_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 44 105
No external refs found!