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  5. Aspi01Gene49949.t1

Aspi01Gene49949.t1 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A, Aspi01Gene49949

Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene49949.t1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Als_g07746 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.06 OrthoFinder output from all 47 species
LOC_Os05g02040.1 RPA70C,... component RPA1 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
Zm00001e029651_P001 Zm00001e029651 component RPA1 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 826 840
IPR007199 Rep_factor-A_N 5 101
IPR031657 REPA_OB_2 397 501
IPR004365 NA-bd_OB_tRNA 287 359
IPR013955 Rep_factor-A_C 558 707
No external refs found!