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  5. Aspi01Gene49428.t1

Aspi01Gene49428.t1 (KNAT3, Aspi01Gene49428)


Aliases : KNAT3, Aspi01Gene49428

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene49428.t1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00264520 KNAT7, IXR11,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Azfi_s0574.g078063 KNAT3 KNOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s2491.g111832 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=16-543 0.02 OrthoFinder output from all 47 species
LOC_Os03g51710.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os06g43860.1 KNAT3, LOC_Os06g43860 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Ore_g29053 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo135843 KNAT4 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005540 KNOX1 46 81
IPR005541 KNOX2 108 158
IPR013103 RVT_2 365 540
No external refs found!