Aspi01Gene49142.t1 (Aspi01Gene49142)

Aliases : Aspi01Gene49142

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene49142.t1
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00085870	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
AT2G36710	No alias	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G19730	No alias	Pectin lyase-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G26810	No alias	Pectin lyase-like superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G55590	QRT1	Pectin lyase-like superfamily protein	0.01	OrthoFinder output from all 47 species
Aop_g69965	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene42303.t1	Aspi01Gene42303	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0188.g056807	No alias	pectin methylesterase & original description: CDS=1-903	0.03	OrthoFinder output from all 47 species
Cba_g34624	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G008900.1	Ceric.03G008900	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.10G071300.1	Ceric.10G071300	pectin methylesterase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.10G076400.1	Ceric.10G076400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.14G017300.1	Ceric.14G017300	pectin methylesterase & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.37G019200.1	Ceric.37G019200	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.37G019300.1	Ceric.37G019300	pectin methylesterase & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.37G019400.1	Ceric.37G019400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01013838001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.02	OrthoFinder output from all 47 species
GSVIVT01015290001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Len_g12523	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428207g0010	No alias	Probable pectinesterase 53 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_14449g0010	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_16389g0020	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
MA_18312g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_304854g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_7274893g0010	No alias	Putative pectinesterase 11 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
MA_99816g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp2g19430.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp4g01190.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Msp_g38949	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03532	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g19023	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20425	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30829	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g39408	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43683	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01612	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g02205	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g21379	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g28944	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60345	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61465	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016099	No alias	pectin methylesterase & original description: CDS=1-1224	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016132	No alias	pectin methylesterase & original description: CDS=1-684	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025813	No alias	pectin methylesterase & original description: CDS=1-1236	0.03	OrthoFinder output from all 47 species
Sam_g36158	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g079180.4.1	Solyc01g079180	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Solyc12g098340.2.1	Solyc12g098340	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Spa_g29378	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e029074_P001	Zm00001e029074	pectin methylesterase	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	71	356

External Links

No external refs found!

Aspi01Gene49142.t1 (Aspi01Gene49142)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation