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  5. Aspi01Gene48921.t1

Aspi01Gene48921.t1 (AT-GTL1, GTL1,...)


Aliases : AT-GTL1, GTL1, AT-GTL2, Aspi01Gene48921

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene48921.t1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
AT1G76890 AT-GT2, GT2 No description available 0.03 OrthoFinder output from all 47 species
Als_g09478 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59070 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03068 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39107 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08613 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26898 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38519 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
LOC_Os03g02240.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g07748 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19098 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19264 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427500g0020 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
MA_934266g0010 PTL transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Ore_g36845 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42672 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35967 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60651 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Spa_g13282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40341 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19131 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Tin_g31947 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000092_P003 AT-GTL1, GTL1,... transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Zm00001e007383_P001 Zm00001e007383 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Zm00001e012540_P001 Zm00001e012540 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 554 642
IPR044822 Myb_DNA-bind_4 210 296
No external refs found!