Aspi01Gene48842.t1 (ATHB13, Aspi01Gene48842)

Aliases : ATHB13, Aspi01Gene48842

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene48842.t1
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00215130	ATHB5, ATHB-5,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AMTR_s00008p00214750	HB6, ATHB6,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00253290	ATHB13,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AMTR_s00040p00235500	HB51, ATHB51,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.04	OrthoFinder output from all 47 species
AT3G01220	ATHB20, HB20	homeobox protein 20	0.03	OrthoFinder output from all 47 species
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.03	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.02	OrthoFinder output from all 47 species
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.03	OrthoFinder output from all 47 species
AT5G15150	ATHB3, HB-3, ATHB-3, HAT7	homeobox 3	0.04	OrthoFinder output from all 47 species
AT5G53980	ATHB52, HB52	homeobox protein 52	0.03	OrthoFinder output from all 47 species
AT5G66700	ATHB53, HB53, HB-8	homeobox 53	0.01	OrthoFinder output from all 47 species
Adi_g016627	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g082074	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ala_g12773	No alias	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Als_g23746	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g37063	ATHB22, HB22	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g11711	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0040.g026630	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s2471.g111662	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s3184.g114979	No alias	not classified & original description: CDS=620-892	0.04	OrthoFinder output from all 47 species
Cba_g08571	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g35111	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.09G061500.1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.26G054300.1	ATHB16, HB16,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g21371	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g34453	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02564	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Dcu_g11265	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g07592	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01009083001	ATHB16, HB16, ATHB-16	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
GSVIVT01019655001	HB-7, ATHB-7, ATHB7	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_07209	ATHB3, HB-3, ATHB-3, HAT7	Homeobox-leucine zipper protein HAT7 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os03g07450.1	ATHB13, LOC_Os03g07450	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os04g45810.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os08g32080.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os08g32085.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os09g35910.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Len_g19610	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g03884	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g13122	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
MA_19453g0050	ATHB1, ATHB-1,...	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g05256	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Msp_g09793	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Msp_g44127	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Nbi_g06999	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g41934	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g19828	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pnu_g07961	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Pnu_g15485	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Smo18217	ATHB16, HB16, ATHB-16	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Solyc02g067410.2.1	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc02g087840.3.1	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc03g082550.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc06g053220.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc09g008810.3.1	HB51, ATHB51,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Solyc11g010270.2.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Spa_g05577	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g16234	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g38872	AtHB23, HB23	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g55691	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g28990	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e000532_P002	ATHB13, Zm00001e000532	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e002803_P001	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e004824_P001	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e012829_P001	ATHB13, Zm00001e012829	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e015717_P003	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e034785_P001	HB-12, ATHB-12,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e038901_P001	ATHB13, Zm00001e038901	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	107	157

External Links

No external refs found!

Aspi01Gene48842.t1 (ATHB13, Aspi01Gene48842)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation