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  5. Aspi01Gene48429.t2

Aspi01Gene48429.t2 (Aspi01Gene48429)


Aliases : Aspi01Gene48429

Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene48429.t2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00053860 KAN, KAN1,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00094p00028710 APL, WDY,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g114670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00792 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aob_g04252 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g05188 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.13G021000.1 KAN, KAN1,... KANADI-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g05684 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Lfl_g05894 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g04815 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12621 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g59875 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pnu_g22623 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc04g008480.2.1 Solyc04g008480 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Spa_g03187 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g55221 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g30427 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013626_P001 Zm00001e013626 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e014339_P001 Zm00001e014339 Putative Myb family transcription factor At1g14600... 0.01 OrthoFinder output from all 47 species
Zm00001e022412_P003 KAN2, Zm00001e022412 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 49 99
IPR025756 Myb_CC_LHEQLE 142 188
No external refs found!