Aliases : AGL30, Aspi01Gene48068
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00266470 | SOC1, AGL20,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00002p00262770 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00010p00264750 | AGL30,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27230 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01006592001 | AGL61, DIA | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033253001 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g07430.1 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g45770.1 | AGL6, LOC_Os02g45770 | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g11614.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g23950.1 | LOC_Os06g23950 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g10540.3 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Len_g31418 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_34737g0010 | AGL17 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0932.g027847 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g089210.4.1 | AGL7, AP1, Solyc02g089210 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g064840.4.1 | STK, AGL11,... | no description available(sp|f6i457|ag11c_vitvi : 172.0) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005705_P004 | AGL7, AP1, Zm00001e005705 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 10 | 54 |
No external refs found! |