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  5. Aspi01Gene47903.t1

Aspi01Gene47903.t1 (AGO1, Aspi01Gene47903)


Aliases : AGO1, Aspi01Gene47903

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene47903.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AMTR_s00083p00065730 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 OrthoFinder output from all 47 species
Als_g29359 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28524 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ehy_g07100 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Gb_34642 PNH, AGO10, ZLL RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Pir_g52026 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Pnu_g19031 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007503 AGO1 not classified & original description: CDS=68-2746 0.03 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032472 ArgoL2 585 632
IPR003100 PAZ_dom 472 575
IPR014811 ArgoL1 397 446
IPR003165 Piwi 676 960
IPR032474 Argonaute_N 262 387
No external refs found!