Solyc02g014220.3.1 (Solyc02g014220.3)


Aliases : Solyc02g014220.3

Description : 26.3.4 misc.gluco-, galacto- and mannosidases.endoglucanase glycosyl hydrolase 9C1 (GH9C1)


Gene families : OG_01_0000062 (Gene family) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g014220.3.1
Cluster HCCA cluster: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT1G19940 AtGH9B5, GH9B5 glycosyl hydrolase 9B5 0.03 Gene family
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.02 Gene family
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.02 Gene family
AT1G71380 ATGH9B3, CEL3, ATCEL3 cellulase 3 0.03 Gene family
GSVIVT01018619001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01032798001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01037210001 No alias 10.6.1 cell wall.degradation.cellulases and beta... 0.03 Gene family
LOC_Os04g57860 Os04g0674800 26.3.4 misc.gluco-, galacto- and... 0.1 Gene family
LOC_Os06g13830 Os06g0247900 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
LOC_Os08g32940 Os08g0425300 10.6.1 cell wall.degradation.cellulases and beta... 0.05 Gene family
LOC_Os09g36350 Os09g0533900 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
MA_10241783g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.05 Gene family
MA_74652g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Smo144066 PACid_15415509 No description available 0.02 Gene family
Smo75214 PACid_15411249 No description available 0.03 Gene family
Smo99802 PACid_15419508 No description available 0.02 Gene family
Solyc02g014225.1.1 Solyc02g014225.1 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
Solyc04g081300.3.1 Solyc04g081300.3 10.6.1 cell wall.degradation.cellulases and beta... 0.03 Gene family
Solyc08g082250.3.1 Solyc08g082250.3 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Solyc08g083210.3.1 Solyc08g083210.3 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
Solyc12g055970.2.1 Solyc12g055970.2 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
Zm00001d014782 GRMZM2G153987 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d017978 GRMZM2G151257 10.6.1 cell wall.degradation.cellulases and beta... 0.05 Gene family
Zm00001d025475 GRMZM2G125436 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d026605 GRMZM2G343144 26.3.4 misc.gluco-, galacto- and... 0.1 Gene family
Zm00001d051814 GRMZM2G125991 10.6.1 cell wall.degradation.cellulases and beta... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019028 CBM_49 541 619
IPR001701 Glyco_hydro_9 29 487
No external refs found!