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  5. Aspi01Gene47629.t1

Aspi01Gene47629.t1 (GCT, Aspi01Gene47629)


Aliases : GCT, Aspi01Gene47629

Description : not classified & original description: none


Gene families : OG0005581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005581_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene47629.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00198p00028070 GCT,... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
AT1G55325 GCT RNA polymerase II transcription mediators 0.04 OrthoFinder output from all 47 species
Adi_g004766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37172 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aob_g28951 GCT component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ceric.39G047500.1 GCT, Ceric.39G047500 component *(MED13) of kinase module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
LOC_Os05g37500.1 GCT, LOC_Os05g37500 component MED13 of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Len_g28451 GCT component *(MED13) of kinase module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
MA_10431052g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_577306g0010 GCT no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_84527g0010 GCT component MED13 of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Mp1g01940.1 GCT component MED13 of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ore_g36609 GCT component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026430 GCT component *(MED13) of kinase module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Solyc04g039950.4.1 GCT, Solyc04g039950 component MED13 of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Zm00001e036721_P002 GCT, Zm00001e036721 component MED13 of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021643 Mediator_Med13_N 43 277
No external refs found!