1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene46596.t2

Aspi01Gene46596.t2 (LDL3, Aspi01Gene46596)


Aliases : LDL3, Aspi01Gene46596

Description : histone demethylase *(KDM1d) & original description: none


Gene families : OG0003426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene46596.t2
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Adi_g011994 LDL3 histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05833 LDL3 histone demethylase *(KDM1d) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11027 LDL3 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10966 LDL3 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04294 LDL3 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08319 LDL3 histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36106 No alias histone demethylase *(KDM1d) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10310 LDL3 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26760 LDL3 histone demethylase *(KDM1d) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007526 SWIRM 717 791
IPR002937 Amino_oxidase 1131 1617
No external refs found!