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  5. Pp3c26_12400V3.1

Pp3c26_12400V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0000421 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000421_tree ,
OG_02_0000820 (LandPlants) Phylogenetic Tree(s): OG_02_0000820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c26_12400V3.1
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
LOC_Os12g21700.1 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
MA_137427g0010 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
MA_19559g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
AMTR_s00013p00248880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 LandPlants
GSVIVT01019119001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 LandPlants
MA_137427g0010 No alias C3H zinc finger transcription factor 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 289 311
IPR000571 Znf_CCCH 85 109
IPR000571 Znf_CCCH 39 63
IPR000571 Znf_CCCH 242 266
No external refs found!