Solyc01g111520.3.1 (Solyc01g111520.3)


Aliases : Solyc01g111520.3

Description : 35.1.19 not assigned.no ontology.C2 domain-containing protein Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. synaptotagmin A (SYTA)


Gene families : OG_01_0000216 (Gene family) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g111520.3.1
Cluster HCCA cluster: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
AT2G20990 NTMC2TYPE1.1,... synaptotagmin A 0.05 Gene family
AT5G11100 NTMC2TYPE2.2,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 Gene family
Cre01.g044600 No alias 35.1.19 not assigned.no ontology.C2 domain-containing... 0.01 Gene family
Cre12.g559450 No alias No description available 0.01 Gene family
LOC_Os01g60340 Os01g0819150,... 35.1.19 not assigned.no ontology.C2 domain-containing... 0.03 Gene family
Zm00001d019472 GRMZM2G092129 30.3 signalling.calcium NTMC2T4 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000008 C2_dom 419 521
IPR000008 C2_dom 260 361
IPR039010 Synaptotagmin_SMP 67 247
No external refs found!