Aspi01Gene45259.t1 (ATCSLD2, CSLD2,...)

Aliases : ATCSLD2, CSLD2, Aspi01Gene45259

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene45259.t1
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	CSLD1, ATCSLD1,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00129900	ATCSLD4, CSLD4,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00200560	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
AT2G32530	ATCSLB03, CSLB03, ATCSLB3	cellulose synthase-like B3	0.03	OrthoFinder output from all 47 species
AT2G32610	ATCSLB01, ATCSLB1, CSLB01	cellulose synthase-like B1	0.02	OrthoFinder output from all 47 species
AT2G32620	ATCSLB02, ATCSLB2, CSLB02	cellulose synthase-like B	0.04	OrthoFinder output from all 47 species
Aob_g23590	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g28659	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g30203	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Cba_g07717	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ceric.30G072100.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g34792	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dcu_g37271	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dde_g48668	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01007039001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01021798001	CSLD1, ATCSLD1	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
GSVIVT01030464001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01030467001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01032096001	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Gb_14756	ATCSLE1, CSLE1	Cellulose synthase-like protein E2 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
LOC_Os06g22980.1	CSLD1, ATCSLD1,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
LOC_Os07g36610.1	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g36750.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os10g42750.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Mp7g07800.1	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Ppi_g05332	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g16136	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g24445	No alias	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Sam_g27647	No alias	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Sam_g38935	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo73698	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Solyc07g005840.2.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc07g043390.4.1	ATCSLG3, CSLG3,...	Cellulose synthase-like protein G1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Spa_g39367	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Zm00001e002486_P001	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Zm00001e010533_P001	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
Zm00001e037015_P002	CSLD1, ATCSLD1,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Zm00001e039669_P001	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	413	1164

External Links

No external refs found!

Aspi01Gene45259.t1 (ATCSLD2, CSLD2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation