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Aliases : RPL16A
Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000171 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000171_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00200160 | RPL16A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 39 species | |
| AMTR_s00025p00203150 | RPL16A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 39 species | |
| AT3G58700 | No alias | Ribosomal L5P family protein | 0.01 | OrthoFinder output from all 39 species | |
| AT4G18730 | RPL16B | ribosomal protein L16B | 0.02 | OrthoFinder output from all 39 species | |
| AT5G45775 | No alias | Ribosomal L5P family protein | 0.01 | OrthoFinder output from all 39 species | |
| Adi_g004325 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Adi_g027413 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| Adi_g045171 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| Adi_g080914 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Ala_g17681 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Als_g43983 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Aop_g59541 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Azfi_s0350.g066549 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Cba_g44699 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| Cba_g45491 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| Cba_g55730 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Dac_g00272 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Dcu_g24100 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Ehy_g09657 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| GSVIVT01020743001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 39 species | |
| GSVIVT01021244001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 39 species | |
| Gb_08546 | RPL16A | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| LOC_Os01g10820.1 | RPL16A, LOC_Os01g10820 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| LOC_Os05g11710.1 | RPL16A, LOC_Os05g11710 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| LOC_Os06g35730.1 | RPL16A, LOC_Os06g35730 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| Len_g36427 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| Lfl_g26705 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| MA_86694g0010 | RPL16A | component RPL11 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
| Mp2g24740.1 | RPL16A | component RPL11 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
| Msp_g09123 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Pp3c11_8070V3.1 | RPL16A, Pp3c11_8070 | ribosomal protein L16B | 0.01 | OrthoFinder output from all 39 species | |
| Pp3c27_2260V3.1 | RPL16A, Pp3c27_2260 | Ribosomal L5P family protein | 0.02 | OrthoFinder output from all 39 species | |
| Pp3c5_3870V3.1 | RPL16A, Pp3c5_3870 | Ribosomal L5P family protein | 0.01 | OrthoFinder output from all 39 species | |
| Sacu_v1.1_s0072.g016923 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Sam_g17383 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
| Smo444767 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 39 species | |
| Solyc02g086240.3.1 | RPL16A, Solyc02g086240 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| Solyc07g055230.4.1 | RPL16A, Solyc07g055230 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| Solyc10g007980.3.1 | RPL16A, Solyc10g007980 | component RPL11 of LSU proteome component | 0.04 | OrthoFinder output from all 39 species | |
| Solyc12g010930.2.1 | RPL16A, Solyc12g010930 | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 39 species | |
| Spa_g07232 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Spa_g07233 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Spa_g25528 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Tin_g02344 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
| Zm00001e014363_P001 | Zm00001e014363 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 39 species | |
| Zm00001e024913_P001 | RPL16A, Zm00001e024913 | component RPL11 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
| Zm00001e026886_P003 | RPL16A, Zm00001e026886 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species | |
| Zm00001e037255_P001 | RPL16A, Zm00001e037255 | component RPL11 of LSU proteome component | 0.02 | OrthoFinder output from all 39 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030145 | manganese ion binding | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031309 | Ribosomal_L5_C | 7 | 105 |
| No external refs found! |