Aspi01Gene44531.t1 (ATMBD6, MBD6, Aspi01Gene44531)

Aliases : ATMBD6, MBD6, Aspi01Gene44531

Description : methylation reader *(MBD5-6) & original description: none

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene44531.t1

Target	Alias	Description	ECC score	Gene Family Method
Ala_g14271	No alias	methylation reader *(MBD5-6) & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0028.g024028	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: CDS=264-1880	0.03	OrthoFinder output from all 47 species
Azfi_s0158.g053875	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: CDS=259-3537	0.04	OrthoFinder output from all 47 species
Ceric.05G032000.1	MBD05, MBD5,...	methylation reader *(MBD5-6) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.21G081800.1	ATMBD6, MBD6,...	methylation reader *(MBD5-6) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g00835	No alias	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01024953001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Ore_g16367	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014899	No alias	methylation reader *(MBD5-6) & original description: CDS=290-1816	0.03	OrthoFinder output from all 47 species
Spa_g05751	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55639	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	310	360

External Links

No external refs found!