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Aliases : Aspi01Gene44451
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene44451.t2 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272900 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00137550 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G20010 | PTAC9, OSB2 | plastid transcriptionally active 9 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007782 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11596 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11078 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g25745 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g39618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39732 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55750 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g59722 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16691 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15083 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g37529 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19602 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17074 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01015461001 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17466 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45004 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46085 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06724 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g40766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20201 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22972 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40050 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20600 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04516 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16163 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19353 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55202 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59294 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003219 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1521 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo115259 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo125795 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Smo127736 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Smo442088 | CRR22 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| Smo76916 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g28951 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 957 | 1004 |
| IPR002885 | Pentatricopeptide_repeat | 638 | 685 |
| IPR002885 | Pentatricopeptide_repeat | 240 | 286 |
| IPR002885 | Pentatricopeptide_repeat | 539 | 584 |
| IPR002885 | Pentatricopeptide_repeat | 739 | 786 |
| IPR002885 | Pentatricopeptide_repeat | 839 | 886 |
| IPR002885 | Pentatricopeptide_repeat | 340 | 387 |
| IPR002885 | Pentatricopeptide_repeat | 442 | 488 |
| IPR002885 | Pentatricopeptide_repeat | 914 | 939 |
| IPR002885 | Pentatricopeptide_repeat | 416 | 441 |
| IPR002885 | Pentatricopeptide_repeat | 211 | 238 |
| IPR002885 | Pentatricopeptide_repeat | 713 | 738 |
| No external refs found! |