Aspi01Gene44184.t1 (ATPUB17, PUB17,...)

Aliases : ATPUB17, PUB17, Aspi01Gene44184

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene44184.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00030110	PUB15,...	U-box domain-containing protein 15 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00006p00267930	evm_27.TU.AmTr_v1...	U-box domain-containing protein 19 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00007p00217990	evm_27.TU.AmTr_v1...	U-box domain-containing protein 16 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00072p00171260	PUB14, ATPUB14,...	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
AMTR_s00086p00031680	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00153p00035720	ATPUB17, PUB17,...	U-box domain-containing protein 1 OS=Medicago truncatula	0.03	OrthoFinder output from all 47 species
AT1G29340	ATPUB17, PUB17	plant U-box 17	0.04	OrthoFinder output from all 47 species
AT1G60190	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G46510	PUB13, ATPUB13	plant U-box 13	0.05	OrthoFinder output from all 47 species
AT5G01830	No alias	ARM repeat superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g013471	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g026489	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g080188	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g102535	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g05159	PUB12, AtPUB12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06664	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07408	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08869	PUB15	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g03799	ATPUB17, PUB17	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g07222	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g16049	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g16594	PUB14, ATPUB14	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g26320	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g38714	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g01685	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g16654	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17483	PUB15	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00484	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g19192	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene33577.t1	PUB14, ATPUB14,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene44181.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene44182.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0001.g000295	No alias	not classified & original description: CDS=1-2304	0.03	OrthoFinder output from all 47 species
Azfi_s0102.g044585	ATPUB17, PUB17	not classified & original description: CDS=188-889	0.03	OrthoFinder output from all 47 species
Azfi_s0110.g045492	ATPUB17, PUB17	not classified & original description: CDS=1-2295	0.03	OrthoFinder output from all 47 species
Azfi_s0481.g073128	No alias	not classified & original description: CDS=1-237	0.04	OrthoFinder output from all 47 species
Cba_g02580	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G010200.1	Ceric.10G010200	not classified & original description: pacid=50612946...	0.05	OrthoFinder output from all 47 species
Ceric.13G074400.1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.13G093000.1	ATPUB17, PUB17,...	not classified & original description: pacid=50635700...	0.08	OrthoFinder output from all 47 species
Ceric.1Z013500.1	PUB13, ATPUB13,...	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.26G012900.1	Ceric.26G012900	not classified & original description: pacid=50598948...	0.08	OrthoFinder output from all 47 species
Dac_g08066	ATPUB17, PUB17	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g08480	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g23493	PUB18, ATPUB18	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g35977	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g39000	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g26575	No alias	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g51928	PUB14, ATPUB14	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ehy_g06164	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01006112001	PUB8, B80	U-box domain-containing protein 8 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01007275001	PUB9, ATPUB9	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
GSVIVT01016225001	PUB14, ATPUB14	U-box domain-containing protein 14 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01021265001	ATPUB17, PUB17	U-box domain-containing protein 17 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01030205001	No alias	U-box domain-containing protein 16 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01036669001	No alias	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_08792	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula...	0.05	OrthoFinder output from all 47 species
Gb_10627	PUB8, B80	U-box domain-containing protein 13 OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
Gb_20805	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species
Gb_29129	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula...	0.05	OrthoFinder output from all 47 species
Gb_29276	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.09	OrthoFinder output from all 47 species
LOC_Os01g60860.1	LOC_Os01g60860	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os01g72600.1	LOC_Os01g72600	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os05g39930.1	LOC_Os05g39930	U-box domain-containing protein 16 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os08g04470.1	PUB8, B80, LOC_Os08g04470	U-box domain-containing protein 8 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os08g32060.1	LOC_Os08g32060	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
LOC_Os08g37570.1	PUB15, LOC_Os08g37570	U-box domain-containing protein 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Len_g20959	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g08019	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g27907	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10431607g0010	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula...	0.03	OrthoFinder output from all 47 species
MA_196504g0010	No alias	U-box domain-containing protein 1 OS=Medicago truncatula...	0.02	OrthoFinder output from all 47 species
MA_5342g0010	PUB15	U-box domain-containing protein 12 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_69133g0010	PUB14, ATPUB14	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species
MA_9917294g0010	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Msp_g01206	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g31758	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g37725	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03120	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g07136	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g18678	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g38088	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25238	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25617	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g28901	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g12553	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26740	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c10_4480V3.1	ATPUB17, PUB17,...	plant U-box 13	0.01	OrthoFinder output from all 47 species
Ppi_g14332	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000382	No alias	not classified & original description: CDS=1-1704	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003607	ATPUB17, PUB17	not classified & original description: CDS=1-2595	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017096	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: CDS=1-1548	0.03	OrthoFinder output from all 47 species
Smo75609	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula	0.03	OrthoFinder output from all 47 species
Solyc02g072080.1.1	ATPUB17, PUB17,...	U-box domain-containing protein 17 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc02g079740.1.1	PUB8, B80, Solyc02g079740	U-box domain-containing protein 8 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc03g114160.1.1	Solyc03g114160	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species
Solyc04g077850.3.1	Solyc04g077850	U-box domain-containing protein 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc06g076040.3.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Solyc09g056450.4.1	PUB9, ATPUB9,...	U-box domain-containing protein 9 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Solyc12g088360.2.1	Solyc12g088360	U-box domain-containing protein 4 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Spa_g05552	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g07376	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18762	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10003	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003398_P001	PUB15, Zm00001e003398	U-box domain-containing protein 15 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e014377_P001	ATPUB17, PUB17,...	U-box domain-containing protein 4 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Zm00001e014566_P002	PUB9, ATPUB9,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Zm00001e019429_P001	Zm00001e019429	U-box domain-containing protein 16 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e028839_P001	Zm00001e028839	U-box domain-containing protein 16 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	279	350
IPR000225	Armadillo	411	448
IPR000225	Armadillo	451	491

External Links

No external refs found!

Aspi01Gene44184.t1 (ATPUB17, PUB17,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation